Isolation and characterization of extracellular pectin lyase from Penicillium canescens

Biochemistry (Mosc). 2007 May;72(5):565-71. doi: 10.1134/s0006297907050148.

Abstract

Pectin lyase A (molecular weight 38 kD by SDS-PAGE, pI 6.7) was purified to homogeneity from culture broth of the mycelial fungus Penicillium canescens using chromatographic techniques. During genomic library screening, the gene encoding pectin lyase A from P. canescens (pelA) was isolated and sequenced, and the amino acid sequence was generated by applying the multiple alignment procedure (360 residues). A theoretical model for the three dimensional structure of the protein molecule was also proposed. Different properties of pectin lyase A were investigated: substrate specificity, pH- and temperature optimum of activity, stability under different pH and temperature conditions, and the effect of Ca2+ on enzyme activity. In the course of the laboratory trials, it was demonstrated that pectin lyase A from P. canescens could be successfully applied to production and clarification of juice.

MeSH terms

  • Amino Acid Sequence
  • Beverages
  • Calcium / pharmacology
  • Chromatography, Ion Exchange
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Stability
  • Extracellular Space / enzymology*
  • Fruit / enzymology
  • Fruit / metabolism
  • Fungal Proteins / chemistry*
  • Fungal Proteins / genetics
  • Hydrogen-Ion Concentration
  • Hydrolysis / drug effects
  • Isoelectric Focusing
  • Molecular Sequence Data
  • Pectins / metabolism
  • Penicillium / enzymology*
  • Penicillium / genetics
  • Polysaccharide-Lyases / genetics
  • Polysaccharide-Lyases / isolation & purification*
  • Polysaccharide-Lyases / metabolism*
  • Protein Conformation
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Analysis, Protein
  • Sequence Homology, Amino Acid
  • Substrate Specificity
  • Temperature

Substances

  • DNA, Fungal
  • Fungal Proteins
  • Pectins
  • Polysaccharide-Lyases
  • pectin lyase
  • Calcium