Bacteroides coprophilus sp. nov., isolated from human faeces

Int J Syst Evol Microbiol. 2007 Jun;57(Pt 6):1323-1326. doi: 10.1099/ijs.0.64979-0.

Abstract

Three Gram-negative, anaerobic, rod-shaped bacteria (strains CB40, CB41 and CB42(T)) were isolated from human faeces. Based on phylogenetic analysis and specific phenotypic characteristics, these strains were included in the genus Bacteroides, and 16S rRNA gene sequence analysis indicated that these strains represented a novel species. The strains were most closely related to the type strains of Bacteroides barnesiae and Bacteroides salanitronis, with sequence similarities of 93.4 and 89.8 %, respectively. The G+C content of strain CB42(T) is 44.7 mol%. Major fatty acids were anteiso-C(15 : 0), C(16 : 0), iso-C(17 : 0) 3-OH and C(18 : 1)omega9c. On the basis of the data presented, a novel Bacteroides species, Bacteroides coprophilus sp. nov., is proposed, with CB42(T) (=JCM 13818(T)=DSM 18228(T)) as the type strain.

MeSH terms

  • Anaerobiosis
  • Bacterial Typing Techniques
  • Bacteroides / chemistry
  • Bacteroides / classification*
  • Bacteroides / isolation & purification*
  • Bacteroides / physiology
  • Bacteroides Infections / microbiology*
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Feces / microbiology*
  • Genes, rRNA
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AB064919
  • GENBANK/AB260025
  • GENBANK/AB260026