Identification of genetic networks involved in the cell growth arrest and differentiation of a rat astrocyte cell line RCG-12

J Cell Biochem. 2007 Dec 15;102(6):1472-85. doi: 10.1002/jcb.21369.

Abstract

The purpose of the present study is to establish and characterize a conditionally immortalized astrocyte cell line and to clarify the genetic networks responsible for the cell growth arrest and differentiation. A conditionally immortalized astrocyte cell line, RCG-12, was established by infecting primary cultured rat cortical glia cells with a temperature-sensitive simian virus 40 large T-antigen. At a permissive temperature of 33 degrees C, the large T-antigen was expressed and cells grew continuously. On the other hand, the down-regulation of T-antigen at a non-permissive temperature of 39 degrees C led to growth arrest and differentiation. The cells expressed astrocyte-expressed genes such as glial fibrillary acidic protein. Interestingly, the differentiated condition induced by the non-permissive temperature significantly elevated the expression levels of several astrocyte-expressed genes. To identify the detailed mechanisms by which non-permissive temperature-induced cell growth arrest and differentiation, we performed high-density oligonucleotide microarray analysis and found that 556 out of 15,923 probe sets were differentially expressed 2.0-fold. A computational gene network analysis revealed that a genetic network containing up-regulated genes such as RB, NOTCH1, and CDKN1A was associated with the cellular growth and proliferation, and that a genetic network containing down-regulated genes such as MYC, CCNB1, and IGF1 was associated with the cell cycle. The established cell line RCG-12 retains some characteristics of astrocytes and should provide an excellent model for studies of astrocyte biology. The present results will also provide a basis for understanding the detailed molecular mechanisms of the growth arrest and differentiation of astrocytes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigens, Polyomavirus Transforming / metabolism
  • Astrocytes / cytology
  • Astrocytes / metabolism*
  • Astrocytes / physiology*
  • Cell Count
  • Cell Differentiation*
  • Cell Line, Transformed
  • Cell Proliferation
  • Cell Transformation, Viral
  • Cerebral Cortex / cytology
  • Computational Biology / methods
  • Cyclin-Dependent Kinase Inhibitor p21 / metabolism
  • Embryo, Mammalian
  • Gene Expression Regulation / physiology*
  • Gene Regulatory Networks*
  • Glial Fibrillary Acidic Protein / metabolism
  • Immunohistochemistry
  • Models, Genetic
  • Oligonucleotide Array Sequence Analysis
  • Rats
  • Rats, Sprague-Dawley
  • Temperature
  • Transfection

Substances

  • Antigens, Polyomavirus Transforming
  • Cdkn1a protein, rat
  • Cyclin-Dependent Kinase Inhibitor p21
  • Glial Fibrillary Acidic Protein