Identification of a set of KSRP target transcripts upregulated by PI3K-AKT signaling

BMC Mol Biol. 2007 Apr 16:8:28. doi: 10.1186/1471-2199-8-28.

Abstract

Background: KSRP is a AU-rich element (ARE) binding protein that causes decay of select sets of transcripts in different cell types. We have recently described that phosphatidylinositol 3-kinase/AKT (PI3K-AKT) activation induces stabilization and accumulation of the labile beta-catenin mRNA through an impairment of KSRP function.

Results: Aim of this study was to identify additional KSRP targets whose stability and steady-state levels are enhanced by PI3K-AKT activation. First, through microarray analyses of the AU-rich transcriptome in pituitary alphaT3-1 cells, we identified 34 ARE-containing transcripts upregulated in cells expressing a constitutively active form of AKT1. In parallel, by an affinity chromatography-based technique followed by microarray analyses, 12 mRNAs target of KSRP, additional to beta-catenin, were identified. Among them, seven mRNAs were upregulated in cells expressing activated AKT1. Both steady-state levels and stability of these new KSRP targets were consistently increased by either KSRP knock-down or PI3K-AKT activation.

Conclusion: Our study identified a set of transcripts that are targets of KSRP and whose expression is increased by PI3K-AKT activation. These mRNAs encode RNA binding proteins, signaling molecules and a replication-independent histone. The increased expression of these gene products upon PI3K-AKT activation could play a role in the cellular events initiated by this signaling pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cells, Cultured
  • Gene Expression Profiling*
  • Heterogeneous Nuclear Ribonucleoprotein A1
  • Heterogeneous Nuclear Ribonucleoprotein D0
  • Heterogeneous-Nuclear Ribonucleoprotein D / metabolism
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B / metabolism
  • Mice
  • Oligonucleotide Array Sequence Analysis
  • Phosphatidylinositol 3-Kinases / metabolism
  • Phosphatidylinositol 3-Kinases / physiology*
  • Protein Binding
  • Proto-Oncogene Proteins c-akt / genetics
  • Proto-Oncogene Proteins c-akt / metabolism
  • Proto-Oncogene Proteins c-akt / physiology*
  • RNA Stability / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / isolation & purification
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Rats
  • Recombinant Proteins / genetics
  • Signal Transduction / physiology
  • Trans-Activators / genetics
  • Trans-Activators / metabolism*
  • Transfection
  • Up-Regulation

Substances

  • Heterogeneous Nuclear Ribonucleoprotein A1
  • Heterogeneous Nuclear Ribonucleoprotein D0
  • Heterogeneous-Nuclear Ribonucleoprotein D
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B
  • Hnrnpd protein, rat
  • Hnrpd protein, mouse
  • Khsrp protein, mouse
  • RNA, Messenger
  • RNA-Binding Proteins
  • Recombinant Proteins
  • Trans-Activators
  • Proto-Oncogene Proteins c-akt