Design and switch of catalytic activity with the DNAzyme-RNAzyme combination

FEBS Lett. 2007 May 1;581(9):1763-8. doi: 10.1016/j.febslet.2007.03.062. Epub 2007 Apr 2.

Abstract

Design and switch of catalytic activity in enzymology remains a subject of intense investigation. Here, we employ a DNAzyme-RNAzyme combination strategy for construction of a 10-23 deoxyribozyme-hammerhead ribozyme combination that targets different sites of the beta-lactamase mRNA. The 10-23 deoxyribozyme-hammerhead ribozyme combination gene was cloned into phagemid vector pBlue-scriptIIKS (+). In vitro the single-strand recombinant phagemid vector containing the combination sequence exhibited 10-23 deoxyribozyme activity, and the linear transcript displayed hammerhead ribozyme activity. In bacteria, the 10-23 deoxyribozyme-hammerhead ribozyme combination inhibited the beta-lactamase expression and repressed the growth of drug-resistant bacteria. Thus, we created a DNAzyme-RNAzyme combination strategy that provides a useful approach to design and switch of catalytic activities for nucleic acid enzymes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteria / genetics
  • Bacteria / metabolism
  • Base Sequence
  • Catalysis
  • Cations, Divalent / metabolism
  • Cloning, Molecular / methods*
  • DNA, Catalytic / chemical synthesis*
  • DNA, Catalytic / metabolism
  • DNA, Recombinant / chemical synthesis
  • Models, Biological
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • RNA, Catalytic / chemical synthesis*
  • RNA, Catalytic / metabolism
  • beta-Lactamases / metabolism

Substances

  • Cations, Divalent
  • DNA, Catalytic
  • DNA, Recombinant
  • RNA, Catalytic
  • hammerhead ribozyme
  • beta-Lactamases