Extent of metal ion-sulfur binding in complexes of thiouracil nucleosides and nucleotides in aqueous solution

J Inorg Biochem. 2007 Apr;101(4):727-35. doi: 10.1016/j.jinorgbio.2006.12.014. Epub 2007 Jan 13.

Abstract

Previously published stability constants of several metal ion (M2+) complexes formed with thiouridines and their 5'-monophosphates, together with recently obtained log K(M(U))(M) versus pK(U)(H) plots for M2+ complexes of uridinate derivatives (U-) allowed now a quantitative evaluation of the effect that the exchange of a (C)O by a (C)S group has on the stability of the corresponding complexes. For example, the stability of the Ni2+, Cu2+ and Cd2+ complexes of 2-thiouridinate is increased by about 1.6, 2.3, and 1.3 log units, respectively, by the indicated exchange of groups. Similar results were obtained for other thiouridinates, including 4-thiouridinate. The structure of these complexes and the types of chelates formed (involving (N3)- and (C)S) are discussed. A recently advanced method for the quantification of the chelate effect allows now also an evaluation of several complexes of thiouridinate 5'-monophosphates. In most instances the thiouracilate coordination dominates the systems, allowing only the formation of small amounts of phosphate-bound isomers. Among the complexes studied only the one formed by Cu2+ with 2-thiouridinate 5'-monophosphate leads to significant amounts of the macrochelated isomer, which means that in this case Cu2+ is able to force the nucleotide from the anti to the syn conformation, allowing thus metal ion binding to both potential sites and this results in the formation of about 58% of the macrochelated isomer. The remaining 42% are species in which Cu2+ is overwhelmingly coordinated to the thiouracilate residue; Cu2+ binding to the phosphate group occurs in this case only in trace amounts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cadmium / chemistry
  • Chelating Agents / chemistry
  • Metals / chemistry*
  • Molecular Structure
  • Nickel / chemistry
  • Nucleosides / chemistry*
  • Nucleotides / chemistry*
  • Organometallic Compounds / chemistry
  • Sulfur / chemistry*
  • Thiouracil / chemistry*
  • Thiouridine / chemistry
  • Water / chemistry

Substances

  • Chelating Agents
  • Metals
  • Nucleosides
  • Nucleotides
  • Organometallic Compounds
  • Cadmium
  • Water
  • Thiouridine
  • Thiouracil
  • Sulfur
  • Nickel