Manipulation of cell cycle progression can counteract the apparent loss of correction frequency following oligonucleotide-directed gene repair

BMC Mol Biol. 2007 Feb 6:8:9. doi: 10.1186/1471-2199-8-9.

Abstract

Background: Single-stranded oligonucleotides (ssODN) are used routinely to direct specific base alterations within mammalian genomes that result in the restoration of a functional gene. Despite success with the technique, recent studies have revealed that following repair events, correction frequencies decrease as a function of time, possibly due to a sustained activation of damage response signals in corrected cells that lead to a selective stalling. In this study, we use thymidine to slow down the replication rate to enhance repair frequency and to maintain substantial levels of correction over time.

Results: First, we utilized thymidine to arrest cells in G1 and released the cells into S phase, at which point specific ssODNs direct the highest level of correction. Next, we devised a protocol in which cells are maintained in thymidine following the repair reaction, in which the replication is slowed in both corrected and non-corrected cells and the initial correction frequency is retained. We also present evidence that cells enter a senescence state upon prolonged treatment with thymidine but this passage can be avoided by removing thymidine at 48 hours.

Conclusion: Taken together, we believe that thymidine may be used in a therapeutic fashion to enable the maintenance of high levels of treated cells bearing repaired genes.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Cell Cycle*
  • Cell Division / drug effects
  • Cell Division / genetics*
  • Cells, Cultured
  • Cellular Senescence / drug effects
  • DNA Repair / drug effects
  • DNA Repair / genetics*
  • DNA Replication / drug effects
  • Genetic Therapy / methods*
  • Humans
  • Oligonucleotides / therapeutic use*
  • Thymidine / pharmacology
  • Time Factors

Substances

  • Oligonucleotides
  • Thymidine