Carbohydrate microarrays as tools in HIV glycobiology

Curr Pharm Des. 2007;13(2):173-83. doi: 10.2174/138161207779313650.

Abstract

Progress in carbohydrate microarray technology has positioned the glycochip among the expanding set of biophysical tools available to researchers. Synthetically-derived glycochips unite established microarray techniques with the versatility and structural precision of synthetic carbohydrate chemistry. A comprehensive demonstration of carbohydrate microarrays is illustrated by the chip-based study of protein/carbohydrate and protein/glycoprotein interactions as they relate to HIV glycobiology. Composed of a series of high-mannose oligosaccharides, carbohydrate microarrays were prepared utilizing a covalent linking strategy to immobilize synthetically-defined glycans in a uniform orientation. In concert with a simple glycoprotein array, these microarrays were used to establish the individual and competitive binding profiles of five gp120 binding proteins--DC-SIGN, CD4, 2G12 cyanovirin-N, and scytovirin--and established the carbohydrate structural requirements for these interactions.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Carbohydrates / analysis*
  • Carbohydrates / chemistry
  • Carbohydrates / genetics
  • Glycoproteins / analysis
  • Glycoproteins / chemistry
  • Glycoproteins / genetics
  • HIV Antibodies / analysis
  • HIV Antibodies / genetics
  • HIV Infections / diagnosis
  • HIV Infections / genetics
  • HIV Seropositivity / diagnosis
  • HIV Seropositivity / genetics
  • HIV-1 / genetics
  • HIV-1 / isolation & purification*
  • Humans
  • Microarray Analysis / methods*
  • Microarray Analysis / trends

Substances

  • Carbohydrates
  • Glycoproteins
  • HIV Antibodies