High hydrostatic pressure approach proves RNA catalytic activity without magnesium

Int J Biol Macromol. 2007 Jun 1;41(1):30-5. doi: 10.1016/j.ijbiomac.2006.12.002. Epub 2006 Dec 17.

Abstract

High hydrostatic pressure (HHP) technique was used to evaluate a mechanism of RNA hydrolysis with RNA. We showed that hammerhead ribozyme specifically cleaves RNA substrate at HHP in the absence of Mg(2+). A deoxyribozyme "10-23" was active in the same conditions. These results pointed out that the hydrolytic activity of nucleic acid depends on proper tertiary structure of a complex with a substrate. They prove that magnesium ion is not directly involved in catalysis process. On that basis we show the mechanism of RNA hydrolysis catalyzed with nucleic acids at HHP.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Hydrolysis
  • Hydrostatic Pressure
  • In Vitro Techniques
  • Magnesium / metabolism
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • RNA, Catalytic / chemistry*
  • RNA, Catalytic / genetics
  • RNA, Catalytic / metabolism*
  • RNA, Viral / chemistry
  • RNA, Viral / genetics
  • RNA, Viral / metabolism

Substances

  • RNA, Catalytic
  • RNA, Viral
  • Magnesium