Cloning and expression analysis of an Atlantic salmon (Salmo salar L.) tapasin gene

Dev Comp Immunol. 2007;31(7):708-19. doi: 10.1016/j.dci.2006.10.004. Epub 2006 Nov 20.

Abstract

Loading of the major histocompatibility complex (MHC) class I molecule with peptide is mediated by the multimeric peptide-loading complex in the ER where the glycoprotein tapasin (TAPBP) is required for stabilization of the complex and for control of peptide loading onto MHC class I. To expand our knowledge on antigen presentation genes in Atlantic salmon, we isolated a full-length salmon tapasin cDNA sequence (Sasa-TAPBP). It encoded a 443 bp amino acid sequence with two N-glycosylation sites, two conserved mammalian tapasin signature motifs, two Ig superfamily (IgSf) domains, a transmembrane (TM) domain and an ER-retention KK motif at the C-terminal end, indicative of a similar function as mammalian tapasins. We analysed the regulation of Sasa-TAPBP under immunostimulatory conditions and found an mRNA-upregulation during early infectious salmon anemia virus (ISAV) infection and poly I:C stimulation in vivo and in vitro, in line with our previous findings for other MHC class I pathway genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cloning, Molecular
  • Fish Diseases / genetics*
  • Fish Diseases / immunology
  • Fish Diseases / virology
  • Histocompatibility Antigens Class I / immunology
  • Isavirus / immunology
  • Membrane Transport Proteins / biosynthesis
  • Membrane Transport Proteins / genetics*
  • Molecular Sequence Data
  • Orthomyxoviridae Infections / genetics
  • Orthomyxoviridae Infections / immunology
  • Orthomyxoviridae Infections / veterinary*
  • Orthomyxoviridae Infections / virology
  • Phylogeny
  • RNA, Messenger / biosynthesis
  • RNA, Messenger / genetics
  • Reverse Transcriptase Polymerase Chain Reaction / veterinary
  • Salmo salar / genetics*
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Up-Regulation

Substances

  • Histocompatibility Antigens Class I
  • Membrane Transport Proteins
  • RNA, Messenger
  • tapasin

Associated data

  • GENBANK/DQ451008