Stability and activity improvement of cephalosporin esterase EstB from Burkholderia gladioli by directed evolution and structural interpretation of muteins

J Biotechnol. 2007 Mar 30;129(1):98-108. doi: 10.1016/j.jbiotec.2006.10.008. Epub 2006 Oct 20.

Abstract

Esterase EstB from Burkholderia gladioli, which belongs to a family of esterases related to beta-lactamases and DD-peptidases was evolved for increased stability and simultaneously maintaining high cephalosporin C deacetylation activity. Random mutagenesis PCR was used to generate up to 5 aa substitutions per gene. A newly designed colony filter-screening assay, which was based on pH change after deacetylation of cephalosporin C in presence of DMF was established. In a first evolution round employing random mutagenesis, which included about 10(6) mutants, a set of interesting mutants was isolated. Distinct mutations identified as significant for stability were combined by a rational recombination step and the resulting recombinant was further evolved by an additional random mutagenesis round. After screening an additional 10(5) clones, it was possible to isolate a variant of EstB having more than 100-fold better activity in reactions containing 35% DMF. This mutant also showed a high increase in temperature stability (T(m) was raised by 13 degrees C) and retained high activity towards cephalosporin C under standard assay conditions. The molecular effects of mutations found in random mutants are discussed in view of the three-dimensional structure of wild-type EstB.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Burkholderia gladioli / enzymology*
  • Calorimetry, Differential Scanning
  • Directed Molecular Evolution / methods*
  • Enzyme Stability
  • Esterases / metabolism*
  • Half-Life
  • Kinetics
  • Models, Molecular
  • Mutagenesis
  • Mutant Proteins / chemistry*
  • Mutant Proteins / isolation & purification
  • Mutation / genetics
  • Protein Structure, Secondary
  • Sequence Analysis, Protein
  • Transition Temperature

Substances

  • Mutant Proteins
  • Esterases