SNPs and interaction analyses of noelin 2, myocilin, and optineurin genes in Japanese patients with open-angle glaucoma

Invest Ophthalmol Vis Sci. 2006 Dec;47(12):5368-75. doi: 10.1167/iovs.06-0196.

Abstract

Purpose: To evaluate the noelin 2 gene as a disease-causing factor for open-angle glaucoma (OAG) and the interactions between the noelin 2 (OLFM2), optineurin (OPTN), and myocilin (MYOC) genes.

Methods: OLFM2 was analyzed in 770 Japanese subjects including 215 patients with elevated intraocular pressure (IOP), 277 with normal IOP, 38 with juvenile open-angle glaucoma, and 240 control subjects. Two single-nucleotide polymorphisms (SNPs) in OPTN (c.412G-->A and c.603T-->A) and one SNP in MYOC (c.227G-->A) were examined. Single genes were investigated by univariate analysis and the gene-gene interactions by logistic regression analysis. Associations between genotypes and clinical characteristics at the time of diagnosis were examined.

Results: In OLFM2, 12 sequence variants were identified in 770 Japanese subjects. Arg144Gln (exon 4) was identified in two (0.3%) of the patients and in none of the control subjects. Combinations of OLFM2/317A and OPTN/412A or OLFM2/1281T and OPTN/412A were associated with patients with elevated IOP (P = 0.018 or P = 0.012, respectively). The combination of OLFM2/317G and OPTN/603A was significantly associated with elevated IOP (P = 0.018). No significant association was detected between SNPs in OLFM2 and in MYOC. Patients with normal IOP and with OLFM2/678A+OPTN/412G or OLFM2/1281C+OPTN/412G had significantly worse visual field scores (P = 0.022 or 0.030, respectively).

Conclusions: The Arg144Gln mutation in OLFM2 is a possible disease-causing mutation in Japanese patients with OAG. Common polymorphisms in OLFM2 and OPTN may interactively contribute to the development of OAG, indicating a polygenic etiology.

Publication types

  • Multicenter Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Asian People / genetics
  • Cell Cycle Proteins
  • Chromatography, High Pressure Liquid
  • Cytoskeletal Proteins / genetics*
  • DNA Mutational Analysis
  • Extracellular Matrix Proteins / genetics*
  • Eye Proteins / genetics*
  • Genotype
  • Glaucoma, Open-Angle / genetics*
  • Glycoproteins / genetics*
  • Humans
  • Intraocular Pressure
  • Japan
  • Membrane Transport Proteins
  • Middle Aged
  • Mutation
  • Ocular Hypertension / genetics
  • Polymerase Chain Reaction
  • Polymorphism, Single Nucleotide*
  • Protein Interaction Mapping
  • Transcription Factor TFIIIA / genetics*

Substances

  • Cell Cycle Proteins
  • Cytoskeletal Proteins
  • Extracellular Matrix Proteins
  • Eye Proteins
  • Glycoproteins
  • Membrane Transport Proteins
  • OPTN protein, human
  • Transcription Factor TFIIIA
  • olfactomedin
  • trabecular meshwork-induced glucocorticoid response protein