Deletion and recombination events between the DNA-A and DNA-B components of Indian cassava-infecting geminiviruses generate defective molecules in Nicotiana benthamiana

Virus Res. 2007 Mar;124(1-2):59-67. doi: 10.1016/j.virusres.2006.10.003. Epub 2006 Nov 15.

Abstract

Cloned DNA-B components, belonging to the bipartite begomoviruses Indian cassava mosaic virus (ICMV) and Sri Lankan cassava mosaic virus (SLCMV), family Geminiviridae, when co-inoculated along with previously cloned DNA-A components of the respective viruses onto the experimental host Nicotiana benthamiana, generated defective DNAs (def-DNA) ranging in size from 549 to 1555 nucleotides. All the cloned def-DNAs contained the common region (CR) as well as portions of either DNA-A or DNA-B and, in a few cases, both DNA-A and DNA-B, representing recombinant products, the junction points of which correspond to repeats of 2-11 bases found in the parental molecules. The DNA-B-derived def-DNAs were, in some cases, associated with a decrease in levels of DNA-B, with a concomitant change in the symptoms from downward leaf curling in the older leaves to upward leaf-rolling in newly emerging leaves, more typical of monopartite begomoviruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Blotting, Southern
  • Cloning, Molecular
  • DNA, Viral / chemistry
  • DNA, Viral / genetics*
  • Geminiviridae / genetics*
  • Geminiviridae / isolation & purification
  • Genome, Viral*
  • Manihot / virology
  • Molecular Sequence Data
  • Nicotiana / virology
  • Plant Diseases / virology
  • Recombination, Genetic*
  • Sequence Analysis, DNA
  • Sequence Deletion / genetics*

Substances

  • DNA, Viral

Associated data

  • GENBANK/AM238428
  • GENBANK/AM238429
  • GENBANK/AM238430
  • GENBANK/AM238431
  • GENBANK/AM238432
  • GENBANK/AM238433