Cloning and sequence analysis of a glyceraldehyde-3-phosphate dehydrogenase gene from Ganoderma lucidum

J Microbiol. 2006 Oct;44(5):515-22.

Abstract

A cDNA library of Ganoderma lucidum has been constructed using a Zap Express cloning vector. A glyceraldehyde-3-phosphate dehydrogenase gene (gpd) was isolated from this library by hybridization of the recombinant phage clones with a gpd-specific gene probe generated by PCR. By comparison of the cDNA and the genomic DNA sequences, it was found that the complete nucleotide sequence encodes a putative polypeptide chain of 338 amino acids interrupted by 6 introns. The predicted amino acid sequence of this gene shows a high degree of sequence similarity to the GPD proteins from yeast and filamentous fungi. The promoter region contains a CT-rich stretch, two CAAT boxes, and a consensus TATA box. The possibility of using the gpd promoter in the construction of new transformation vectors is discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cloning, Molecular
  • Codon / genetics
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics
  • Fungal Proteins / genetics*
  • Ganoderma / enzymology
  • Ganoderma / genetics*
  • Gene Expression Regulation, Enzymologic
  • Gene Expression Regulation, Fungal
  • Glyceraldehyde-3-Phosphate Dehydrogenases / genetics*
  • Molecular Sequence Data
  • Phylogeny
  • Promoter Regions, Genetic / genetics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, DNA

Substances

  • Codon
  • DNA, Complementary
  • Fungal Proteins
  • Glyceraldehyde-3-Phosphate Dehydrogenases

Associated data

  • GENBANK/DQ404343
  • GENBANK/DQ404344
  • GENBANK/DQ404345