Gene control by large noncoding RNAs

Sci STKE. 2006 Oct 3;2006(355):pe40. doi: 10.1126/stke.3552006pe40.

Abstract

Large noncoding RNAs (lncRNAs) have emerged as key players in regulating various fundamental cellular processes. Recent reports identify a functional lncRNA, Evf-2, that operates during development to control the expression of specific homeodomain proteins, and they provide important insights into the mechanism of cooperation between a newly discovered nuclear receptor co-repressor protein (SLIRP) and steroid receptor activator RNA. Evf-2 is the first example of lncRNA directly involved in organogenesis in vertebrates.

Publication types

  • Review

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / physiology
  • Alternative Splicing
  • Amino Acid Motifs
  • Animals
  • Cell Line, Tumor
  • Enhancer Elements, Genetic
  • Gene Expression Regulation / genetics
  • Gene Expression Regulation / physiology*
  • Genes, Reporter
  • Histone Acetyltransferases / genetics
  • Histone Acetyltransferases / physiology
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / physiology
  • Humans
  • Mice
  • Nuclear Receptor Coactivator 1
  • Nucleic Acid Conformation
  • Promoter Regions, Genetic
  • RNA / genetics
  • RNA / physiology*
  • RNA, Small Interfering / pharmacology
  • RNA-Binding Proteins / physiology
  • Receptors, Cytoplasmic and Nuclear / genetics
  • Receptors, Cytoplasmic and Nuclear / physiology
  • Repressor Proteins / genetics
  • Repressor Proteins / physiology
  • Transcription Factors / genetics
  • Transcription Factors / physiology
  • Transcription, Genetic / physiology*
  • Transfection

Substances

  • Adaptor Proteins, Signal Transducing
  • Homeodomain Proteins
  • RNA, Small Interfering
  • RNA-Binding Proteins
  • Receptors, Cytoplasmic and Nuclear
  • Repressor Proteins
  • SLIRP protein, human
  • SPHKAP protein, human
  • Transcription Factors
  • RNA
  • Histone Acetyltransferases
  • NCOA1 protein, human
  • Ncoa1 protein, mouse
  • Nuclear Receptor Coactivator 1