Role of ran binding protein 5 in nuclear import and assembly of the influenza virus RNA polymerase complex

J Virol. 2006 Dec;80(24):11911-9. doi: 10.1128/JVI.01565-06. Epub 2006 Sep 27.

Abstract

The influenza A virus RNA-dependent RNA polymerase is a heterotrimeric complex of polymerase basic protein 1 (PB1), PB2, and polymerase acidic protein (PA) subunits. It performs transcription and replication of the viral RNA genome in the nucleus of infected cells. We have identified a nuclear import factor, Ran binding protein 5 (RanBP5), also known as karyopherin beta3, importin beta3, or importin 5, as an interactor of the PB1 subunit. RanBP5 interacted with either PB1 alone or with a PB1-PA dimer but not with a PB1-PB2 dimer or the trimeric complex. The interaction between RanBP5 and PB1-PA was disrupted by RanGTP in vitro, allowing PB2 to bind to the PB1-PA dimer to form a functional trimeric RNA polymerase complex. We propose a model in which RanBP5 acts as an import factor for the newly synthesized polymerase by targeting the PB1-PA dimer to the nucleus. In agreement with this model, small interfering RNA (siRNA)-mediated knock-down of RanBP5 inhibited the nuclear accumulation of the PB1-PA dimer. Moreover, siRNA knock-down of RanBP5 resulted in the delayed accumulation of viral RNAs in infected cells, confirming that RanBP5 plays a biological role during the influenza virus life cycle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus / physiology
  • Amino Acid Sequence
  • Base Sequence
  • Cell Line
  • Cell Nucleus / metabolism*
  • DNA Primers
  • DNA-Directed RNA Polymerases / biosynthesis*
  • Dimerization
  • Electrophoresis, Polyacrylamide Gel
  • Humans
  • Influenza A virus / metabolism*
  • Models, Biological
  • Molecular Sequence Data
  • Protein Binding
  • RNA Interference
  • Sequence Analysis, DNA
  • Viral Proteins / biosynthesis*
  • beta Karyopherins / genetics*
  • beta Karyopherins / metabolism*

Substances

  • DNA Primers
  • IPO5 protein, human
  • Viral Proteins
  • beta Karyopherins
  • DNA-Directed RNA Polymerases