Native trout species, such as the redband trout (Oncorhynchus mykiss), occupy thermally harsh stream habitats in hot, arid rangeland basins of the western United States. Declines in the distribution and abundance of these species has generated interest in understanding how these cold water species survive in these systems, as well as in identifying opportunities to restore these species to their former ranges. The purpose of this study was to assess the potential for thermal stratification to provide thermal refuge for redband trout in stream pools characterized by warm intermittent flow conditions on arid rangelands. We studied vertical thermal stratification in two pools during three summers on Boles Creek located on the Modoc Plateau in extreme northeastern California. Water and air temperature data were collected on a 0.5 h time step from 15-Jun through 15-Sep during 1996, 1997, and 2000 using commercial temperature data-loggers. Water temperature was measured at the top (0.3 m below pool surface) and bottom (0.3 m above pool substrates) of each pool. Vertical thermal stratification occurred within these pools creating conditions as much as 7.6 C cooler and consistently more constant at the bottom of pools compared to pool surface waters. Thermal stratification was dependent upon air temperature with the magnitude of stratification increasing as air temperature increased. The magnitude of thermal stratification varied significantly from year to year, likely reflecting variation in annual weather conditions. The thermal regime in the study pools was often near the upper lethal limit reported for redband trout, but temperatures at the bottom of these pools did offer refuge from lethal temperatures realized near the pool surface. Temperatures at pool bottom were consistently above optimal levels published for redbands.