Genetic characterization of novel reassortant H1N2 influenza A viruses isolated from pigs in southeastern China

Arch Virol. 2006 Nov;151(11):2289-99. doi: 10.1007/s00705-006-0796-x. Epub 2006 Jun 8.

Abstract

In December 2004, three influenza H1N2 viruses were isolated from lung samples of pigs that had died from respiratory disease on a farm in southeastern China. To determine the genetic characterization and probable origin, one of the three isolates, A/Swine/Zhejiang/1/2004 (Sw/ZJ/1/2004), was genetically analyzed. Sw/ZJ/1/2004 was a reassortant with an NA gene most closely related to the corresponding gene from a human-like H3N2 virus circulating in 1995. The remaining seven genes were most closely related to those from the classical swine H1N1 virus. Sw/ZJ/1/2004 appeared to be a novel reassortant H1N2 virus that was genetically distinguishable from other H1N2 viruses found in pigs worldwide. The isolation of Sw/ZJ/1/2004 provided further evidence for pigs serving as a "mixing vessel" for the generation of new reassortant genotypes of influenza viruses and emphasizes the importance of reinforcing influenza virus surveillance in pigs in China.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • China
  • Influenza A Virus, H1N1 Subtype / genetics*
  • Influenza A Virus, H3N2 Subtype / genetics*
  • Influenza A virus / classification
  • Influenza A virus / genetics*
  • Influenza A virus / isolation & purification
  • Lung / virology
  • Molecular Sequence Data
  • Orthomyxoviridae Infections / veterinary*
  • Orthomyxoviridae Infections / virology
  • Phylogeny
  • Reassortant Viruses / classification
  • Reassortant Viruses / genetics*
  • Respiratory Tract Infections / veterinary*
  • Respiratory Tract Infections / virology
  • Sequence Analysis, DNA
  • Sus scrofa
  • Swine
  • Swine Diseases / virology*

Associated data

  • GENBANK/DQ139320
  • GENBANK/DQ139321
  • GENBANK/DQ139322
  • GENBANK/DQ139323
  • GENBANK/DQ139324
  • GENBANK/DQ139325
  • GENBANK/DQ139326
  • GENBANK/DQ139327