The role of inter-subunit ionic interactions in the assembly of Physalis mottle tymovirus

Arch Virol. 2006 Oct;151(10):1917-31. doi: 10.1007/s00705-006-0783-2. Epub 2006 May 29.

Abstract

Physalis mottle tymovirus (PhMV) is a small spherical plant virus with its RNA genome encapsidated in a protein shell made of 180 identical coat protein (CP) subunits. The amino acid residues involved in two interfacial salt bridges, Asp-83/Arg-159 and Arg-68/Asp-150 and Lys-153, were targeted for mutagenesis with a view to delineate the role of interfacial ionic interactions in the subunit folding and assembly of the virus. R159A and D83A-R159A recombinant CP (rCP) mutants formed stable T = 3 capsids, indicating that the D83-R159 interfacial salt bridge is dispensable for the folding and assembly of PhMV. However, D150A and R68Q-D150A mutant rCPs were present in the insoluble fraction, suggesting that the R68-D150 interfacial salt bridge is crucial for subunit folding and assembly. Similarly, K153Q, D83A-K153Q, and H69A-K153Q mutant rCPs were present in the insoluble fraction. Interestingly, the R68Q-D150A, D83A-K153Q, and H69A-K153Q double mutant rCPs could be refolded into partially folded soluble heterogeneous aggregates of 14-16 S. The results further confirm our earlier observation that subunit folding and assembly are concerted events in PhMV.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid Proteins / chemistry
  • Capsid Proteins / genetics
  • Capsid Proteins / metabolism
  • Capsid Proteins / physiology*
  • Ions / metabolism
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Physalis / virology*
  • Protein Folding
  • Protein Subunits / chemistry
  • Protein Subunits / metabolism
  • Protein Subunits / physiology*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Tymovirus / chemistry
  • Tymovirus / physiology*
  • Virus Assembly*

Substances

  • Capsid Proteins
  • Ions
  • Protein Subunits
  • Recombinant Proteins