G-specific RNA-cleaving conjugates of short peptides and oligodeoxyribonucleotides

J Biomol Struct Dyn. 2006 Jun;23(6):591-602. doi: 10.1080/07391102.2006.10507084.

Abstract

Artificial ribonucleases, conjugates of short oligodeoxyribonucleotides and peptides built of arginine, leucine, proline, and serine, were synthesized and assessed in terms of ribonuclease activity and specificity of RNA cleavage. A specific group of the conjugates was identified that display T1-ribonuclease-like activity and cleave RNA predominantly at G-X sequences. Circular dichroism study of the structures of the most active conjugates, free peptide (LR)4G, and oligonucleotides revealed that conjugation of oligonucleotide to the peptide results in a specific peptide folding that possibly provides ribonuclease activity to the conjugate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Pairing
  • Circular Dichroism
  • Guanine / chemistry*
  • Nucleic Acid Conformation
  • Oligodeoxyribonucleotides / chemistry*
  • Oligopeptides / chemistry*
  • Oligopeptides / metabolism*
  • RNA* / chemistry
  • RNA* / metabolism
  • Ribonucleases* / chemistry
  • Ribonucleases* / metabolism
  • Substrate Specificity

Substances

  • Oligodeoxyribonucleotides
  • Oligopeptides
  • Guanine
  • RNA
  • Ribonucleases