Crystallization and preliminary X-ray diffraction analysis of Nsp15 from SARS coronavirus

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Apr 1;62(Pt 4):409-11. doi: 10.1107/S1744309106009407. Epub 2006 Mar 25.

Abstract

The non-structural protein Nsp15 from the aetiological agent of SARS (severe acute respiratory syndrome) has recently been characterized as a uridine-specific endoribonuclease. This enzyme plays an essential role in viral replication and transcription since a mutation in the related H229E human coronavirus nsp15 gene can abolish viral RNA synthesis. SARS full-length Nsp15 (346 amino acids) has been cloned and expressed in Escherichia coli with an N-terminal hexahistidine tag and has been purified to homogeneity. The protein was subsequently crystallized using PEG 8000 or 10 000 as precipitants. Small cubic crystals of the apoenzyme were obtained from 100 nl nanodrops. They belong to space group P4(1)32 or P4(3)32, with unit-cell parameters a = b = c = 166.8 angstroms. Diffraction data were collected to a maximum resolution of 2.7 angstroms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cloning, Molecular
  • Crystallization
  • Endoribonucleases
  • Escherichia coli
  • Macromolecular Substances / chemistry
  • Macromolecular Substances / isolation & purification
  • Peptide Fragments / chemistry
  • Protein Conformation
  • RNA-Dependent RNA Polymerase / chemistry*
  • RNA-Dependent RNA Polymerase / genetics
  • RNA-Dependent RNA Polymerase / isolation & purification
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / isolation & purification
  • Severe acute respiratory syndrome-related coronavirus / chemistry*
  • Viral Nonstructural Proteins / chemistry*
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / isolation & purification
  • X-Ray Diffraction

Substances

  • Macromolecular Substances
  • Peptide Fragments
  • Recombinant Proteins
  • Viral Nonstructural Proteins
  • RNA-Dependent RNA Polymerase
  • Endoribonucleases
  • nidoviral uridylate-specific endoribonuclease