Molecular cloning and tissue-specific expression of intestinal-type fatty acid binding protein in porcine

Yi Chuan Xue Bao. 2006 Feb;33(2):125-32. doi: 10.1016/S0379-4172(06)60031-0.

Abstract

The intestinal fatty acid-binding protein (I-FABP) shows binding specificity for long-chain fatty acids and is proposed to be involved in the uptake of dietary fatty acids and their intracellular transport. In this study, the full-length cDNA of I-FABP was cloned from pig intestine by homology cloning approach combined with 3' and 5' RACE. Sequence analysis and bioinformatics study showed that this cDNA contained 614 nucleotides, with a 399 bp open reading frame (ORF) flanked by a 43 bp 5' UTR and a 172 bp 3' UTR. The encoded 132 amino acids of pig I-FABP with a molecular weight of approximately 15 kDa shared a high sequence identity of 68%-85% with those of other species. In addition, the phylogenetical analysis also indicated that the pig I-FABP was in the same branch with those of other species. The tissue-specific expression of pig I-FABP was measured by Northern hybridization and semi-quantitative RT-PCR. The results demonstrated that pig I-FABP mRNA was extensively present in various tissues, but I-FABP transcript of approximately 620 bp was more abundant in intestine than in other tissues.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Blotting, Northern
  • Cloning, Molecular
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics
  • Fatty Acid-Binding Proteins / classification
  • Fatty Acid-Binding Proteins / genetics*
  • Gene Expression Profiling
  • Humans
  • Intestinal Mucosa / metabolism*
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sus scrofa / genetics*

Substances

  • DNA, Complementary
  • Fatty Acid-Binding Proteins
  • RNA, Messenger

Associated data

  • GENBANK/AY960624