Identification of a novel beta-turn-rich repeat motif in the D hordeins of barley

Biochim Biophys Acta. 1992 Jul 31;1122(2):118-22. doi: 10.1016/0167-4838(92)90313-3.

Abstract

The amino acid sequence of the C-terminal part of a barley D hordein seed protein was deduced from the nucleotide sequence of a partial cDNA. It showed high homology with the HMW glutenin subunits of wheat, both proteins consisting predominately of repeated sequences. Whereas the wheat repeats are based on tri-, hexa- and nonapeptides that are rich in glycine, proline and glutamine, the D hordein also contains eleven copies of a novel unrelated motif: Thr-Thr-Val-Ser. The repeated sequences in the wheat glutenin subunits have been demonstrated to form an unusual spiral supersecondary structure based on beta-turns. Conformational analysis of the Thr-Thr-Val-Ser motif by secondary structure prediction and by circular dichroism spectroscopy of an 18 residue synthetic peptide demonstrates that it also forms beta-turns. Thus, D hordein may also have a spiral structure like that of HMW glutenin, despite the presence of a different repeat motif. This conservation of protein conformation in D hordein and the wheat glutenin subunits may indicate a structural role, perhaps in packing of the proteins within the protein bodies of the developing grain.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Circular Dichroism
  • Glutens
  • Hordeum / genetics*
  • Molecular Sequence Data
  • Plant Proteins / biosynthesis
  • Plant Proteins / genetics*
  • Plant Proteins / isolation & purification
  • Protein Conformation
  • Repetitive Sequences, Nucleic Acid

Substances

  • Plant Proteins
  • Glutens

Associated data

  • GENBANK/M68899
  • GENBANK/M91423
  • GENBANK/M91424
  • GENBANK/M91425
  • GENBANK/M91426
  • GENBANK/M91427
  • GENBANK/M91428
  • GENBANK/M91429
  • GENBANK/M91430
  • GENBANK/X68072