DNA hole transport on an electrode: application to effective photoelectrochemical SNP typing

J Am Chem Soc. 2006 Jan 18;128(2):658-62. doi: 10.1021/ja057040t.

Abstract

A useful feature of DNA is that long-range hole transport through DNA is readily achieved. Photostimulated long-range hole transport through DNA has prospective use in the development of a conceptually new electrochemical single-nucleotide polymorphism (SNP) typing method for use as a versatile platform for gene diagnostics and pharmacogenetics. We have applied artificial DNAs designed for photostimulated long-range hole transport through DNA to SNP typing. By hybridizing photosensitizer-equipped DNA probes, immobilized on gold working electrodes, with a target DNA strand containing an SNP site, we observed a cathodic photocurrent, which markedly changed depending on the nature of the base at the specific site. The use of a combination of hole-transporting bases constitutes a very powerful method for a single-step electrochemical assay applicable to SNP typing of all types of sequences.

MeSH terms

  • Base Sequence
  • DNA / chemistry*
  • DNA Probes
  • Electrochemistry
  • Electrodes
  • Models, Molecular
  • Nucleic Acid Conformation
  • Oligonucleotides / chemistry
  • Photochemistry
  • Polymorphism, Single Nucleotide*

Substances

  • DNA Probes
  • Oligonucleotides
  • DNA