Use of structure-based drug design approaches to obtain novel anthranilic acid acyl carrier protein synthase inhibitors

J Med Chem. 2005 Dec 15;48(25):7960-9. doi: 10.1021/jm050523n.

Abstract

Acyl carrier protein synthase (AcpS) catalyzes the transfer of the 4'-phosphopantetheinyl group from the coenzyme A to a serine residue in acyl carrier protein (ACP), thereby activating ACP, an important step in cell wall biosynthesis. The structure-based design of novel anthranilic acid inhibitors of AcpS, a potential antibacterial target, is presented. An initial high-throughput screening lead and numerous analogues were modeled into the available AcpS X-ray structure, opportunities for synthetic modification were identified, and an iterative process of synthetic modification, X-ray complex structure determination with AcpS, biological testing, and further modeling ultimately led to potent inhibitors of the enzyme. Four X-ray complex structures of representative anthranilic acid ligands bound to AcpS are described in detail.

Publication types

  • Comparative Study

MeSH terms

  • Anti-Bacterial Agents / chemical synthesis*
  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / pharmacology
  • Chromatography, High Pressure Liquid
  • Crystallography, X-Ray
  • Drug Design
  • Drug Resistance, Bacterial
  • Gram-Positive Bacteria / drug effects
  • Ligands
  • Microbial Sensitivity Tests
  • Models, Molecular*
  • Molecular Structure
  • Quantitative Structure-Activity Relationship
  • Stereoisomerism
  • Transferases (Other Substituted Phosphate Groups) / antagonists & inhibitors*
  • Transferases (Other Substituted Phosphate Groups) / chemistry*
  • ortho-Aminobenzoates / chemical synthesis*
  • ortho-Aminobenzoates / chemistry
  • ortho-Aminobenzoates / pharmacology

Substances

  • Anti-Bacterial Agents
  • Ligands
  • ortho-Aminobenzoates
  • Transferases (Other Substituted Phosphate Groups)
  • holo-(acyl-carrier-protein) synthase