Sequence analysis of grapevine isolates of Raspberry ringspot nepovirus

Arch Virol. 2006 Mar;151(3):599-606. doi: 10.1007/s00705-005-0665-z. Epub 2005 Nov 21.

Abstract

The nucleotide sequences of RNAs 1 and 2 of a German isolate of Raspberry ringspot virus (RpRSV) infecting grapevine (RpRSV-Grapevine), as well as partial sequences of another grapevine isolate from Switzerland (RAC815) were determined. The sequences of the protease-polymerase region encoded by RNA1, and the movement protein and coat protein genes encoded by RNA 2, of these isolates were compared with those of other isolates available in databases. The coat proteins of the grapevine isolates formed a sister group to all those from other RpRSV isolates, but whether this resulted from divergence or recombination was uncertain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Molecular Sequence Data
  • Nepovirus / genetics*
  • Nepovirus / isolation & purification
  • Nepovirus / pathogenicity
  • Phylogeny
  • RNA, Viral / genetics
  • Recombination, Genetic
  • Sequence Homology, Amino Acid
  • Viral Proteins / genetics
  • Vitis / virology*

Substances

  • RNA, Viral
  • Viral Proteins

Associated data

  • GENBANK/AY310444
  • GENBANK/AY310445
  • GENBANK/DQ004849
  • GENBANK/DQ004850