Detection of hepatitis C virus RNA by in situ hybridization in paraformaldehyde fixed biopsies

Mem Inst Oswaldo Cruz. 2005 May;100(3):269-72. doi: 10.1590/s0074-02762005000300009. Epub 2005 Aug 15.

Abstract

Fourteen hepatitis C virus (HCV) chronically infected patients were submitted to routine liver biopsy for histological evaluation. Liver samples were assayed to HCV-RNA by in situ hybridization, using digoxigenin labeled probe. HCV genotypes were found to be predominantly type 1 (71.4%), followed by genotype 3 (21.4%), and genotype 2 (7.2%). Alanine-aminotransferase levels were raised in 10 patients. The histopathological scores were minimal (21.4%), mild (57.2%), and moderate (21.4%). Viral RNA was detected in liver cells from nine patients (64.3%). ISH method provides localization and poor confirmation of HCV RNA in the liver tissue of HCV chronic patients.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Alanine Transaminase / blood
  • Biopsy
  • Digoxigenin
  • Female
  • Formaldehyde
  • Genotype
  • Hepacivirus / genetics*
  • Hepacivirus / isolation & purification
  • Hepatitis C, Chronic / pathology
  • Hepatitis C, Chronic / virology*
  • Humans
  • In Situ Hybridization / methods*
  • Liver / pathology
  • Liver / virology*
  • Male
  • Middle Aged
  • Paraffin Embedding
  • Polymorphism, Restriction Fragment Length
  • RNA, Viral / genetics
  • RNA, Viral / isolation & purification*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Severity of Illness Index

Substances

  • RNA, Viral
  • Formaldehyde
  • Alanine Transaminase
  • Digoxigenin