Multiple weak hits confuse complex systems: a transcriptional regulatory network as an example

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 May;71(5 Pt 1):051909. doi: 10.1103/PhysRevE.71.051909. Epub 2005 May 26.

Abstract

Robust systems, like the molecular networks of living cells, are often resistant to single hits such as those caused by high-specificity drugs. Here we show that partial weakening of the Escherichia coli and Saccharomyces cerevisiae transcriptional regulatory networks at a small number (3-5) of selected nodes can have a greater impact than the complete elimination of a single selected node. In both cases, the targeted nodes have the greatest possible impact; still, the results suggest that in some cases broader specificity compounds or multitarget drug therapies may be more effective than individual high-affinity, high-specificity ones. Multiple but partial attacks mimic well a number of in vivo scenarios and may be useful in the efficient modification of other complex systems.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computer Simulation
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Gene Expression Regulation / physiology*
  • Models, Biological*
  • Protein Engineering / methods
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Signal Transduction / physiology*
  • Transcription Factors / metabolism*
  • Transcriptional Activation / physiology*

Substances

  • Escherichia coli Proteins
  • Saccharomyces cerevisiae Proteins
  • Transcription Factors