Terminal antisense oligonucleotide modifications can enhance induced exon skipping

Neuromuscul Disord. 2005 Oct;15(9-10):622-9. doi: 10.1016/j.nmd.2005.06.009.

Abstract

Induction of specific exon skipping during the processing of the dystrophin gene transcript is being pursued as a potential therapy for Duchenne muscular dystrophy. Antisense oligonucleotides directed at motifs involved in pre-mRNA processing can manipulate dystrophin exon incorporation in the mature gene transcript. We have compared the exon skipping ability of oligodeoxyribonucleotides with compounds of the identical sequence incorporating 2'-O-methyl modified bases. Antisense oligonucleotides composed entirely of 2'-O-methyl modified bases on a phosphorothioate backbone were consistently more efficient at inducing exon skipping than comparable oligodeoxyribonucleotides. Chimeric antisense oligonucleotides, mixtures of unmodified and 2'-O-methyl modified bases, induced intermediate levels of exon skipping. In addition, we describe terminal modifications that may be incorporated into the 2'-O-methyl antisense oligonucleotides to further enhance efficiency of exon skipping. Our findings suggest that 2'-O-methyl antisense oligonucleotides should be considered for human clinical trials involving targeted exon skipping in dystrophin gene expression in preference to oligodeoxyribonucleotides.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Cell Line
  • Exons / drug effects
  • Exons / genetics*
  • Mice
  • Mice, Inbred C57BL
  • Muscle, Skeletal / pathology
  • Muscular Dystrophy, Animal
  • Oligonucleotides, Antisense / pharmacology*
  • RNA Precursors / drug effects
  • RNA Precursors / genetics
  • Reverse Transcriptase Polymerase Chain Reaction

Substances

  • Oligonucleotides, Antisense
  • RNA Precursors