Engineering a signal transduction mechanism for protein-based biosensors

Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):10841-5. doi: 10.1073/pnas.0503055102. Epub 2005 Jul 26.

Abstract

Hybridization-induced conformational changes have been successfully used in biosensors for the transduction of DNA-binding events into readily observable optical or electronic signals. Similar signal transduction has not, however, proven of equal utility in protein-based biosensors. The discrepancy arises because, unlike ssDNA, most proteins do not undergo significant conformational changes upon ligand binding. Here, we describe a solution to this problem. We show that an arbitrarily selected, normally well folded protein can be rationally engineered such that it undergoes ligand-induced folding. The engineered protein responds rapidly (milliseconds) and selectively to its target, and it couples recognition with the largest possible conformational change: folding. These traits suggest that ligand-induced folding could serve as an ideal signal-transduction mechanism. Consistent with this claim, we demonstrate a label-free optical biosensor based on the effect that is sufficiently selective to detect its target even in complex, contaminant-ridden samples such as blood serum.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Biosensing Techniques / methods*
  • Humans
  • In Vitro Techniques
  • Kinetics
  • Ligands
  • Mutagenesis
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Conformation
  • Protein Engineering*
  • Protein Folding
  • Proto-Oncogene Proteins / chemistry
  • Proto-Oncogene Proteins / genetics
  • Proto-Oncogene Proteins / metabolism
  • Proto-Oncogene Proteins c-fyn
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Deletion
  • Signal Transduction*
  • src Homology Domains
  • src-Family Kinases / chemistry
  • src-Family Kinases / genetics
  • src-Family Kinases / metabolism

Substances

  • Ligands
  • Proto-Oncogene Proteins
  • Recombinant Proteins
  • FYN protein, human
  • Proto-Oncogene Proteins c-fyn
  • src-Family Kinases