New insights on human T cell development by quantitative T cell receptor gene rearrangement studies and gene expression profiling

J Exp Med. 2005 Jun 6;201(11):1715-23. doi: 10.1084/jem.20042524. Epub 2005 May 31.

Abstract

To gain more insight into initiation and regulation of T cell receptor (TCR) gene rearrangement during human T cell development, we analyzed TCR gene rearrangements by quantitative PCR analysis in nine consecutive T cell developmental stages, including CD34+ lin- cord blood cells as a reference. The same stages were used for gene expression profiling using DNA microarrays. We show that TCR loci rearrange in a highly ordered way (TCRD-TCRG-TCRB-TCRA) and that the initiating Ddelta2-Ddelta3 rearrangement occurs at the most immature CD34+CD38-CD1a- stage. TCRB rearrangement starts at the CD34+CD38+CD1a- stage and complete in-frame TCRB rearrangements were first detected in the immature single positive stage. TCRB rearrangement data together with the PTCRA (pTalpha) expression pattern show that human TCRbeta-selection occurs at the CD34+CD38+CD1a+ stage. By combining the TCR rearrangement data with gene expression data, we identified candidate factors for the initiation/regulation of TCR recombination. Our data demonstrate that a number of key events occur earlier than assumed previously; therefore, human T cell development is much more similar to murine T cell development than reported before.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigens, CD / genetics
  • Antigens, CD / immunology
  • Cell Differentiation / genetics
  • Cell Differentiation / immunology*
  • Cells, Cultured
  • Gene Expression Profiling
  • Gene Expression Regulation / genetics
  • Gene Expression Regulation / immunology*
  • Gene Rearrangement, beta-Chain T-Cell Antigen Receptor / genetics
  • Gene Rearrangement, beta-Chain T-Cell Antigen Receptor / immunology*
  • Gene Rearrangement, delta-Chain T-Cell Antigen Receptor / genetics
  • Gene Rearrangement, delta-Chain T-Cell Antigen Receptor / immunology*
  • Genes, T-Cell Receptor beta / genetics
  • Genes, T-Cell Receptor beta / immunology
  • Humans
  • Mice
  • Oligonucleotide Array Sequence Analysis
  • Receptors, Antigen, T-Cell, gamma-delta / genetics
  • Receptors, Antigen, T-Cell, gamma-delta / immunology
  • Reverse Transcriptase Polymerase Chain Reaction
  • T-Lymphocytes / immunology*

Substances

  • Antigens, CD
  • Receptors, Antigen, T-Cell, gamma-delta