Viral class 1 RNase III involved in suppression of RNA silencing

J Virol. 2005 Jun;79(11):7227-38. doi: 10.1128/JVI.79.11.7227-7238.2005.

Abstract

Double-stranded RNA (dsRNA)-specific endonucleases belonging to RNase III classes 3 and 2 process dsRNA precursors to small interfering RNA (siRNA) or microRNA, respectively, thereby initiating and amplifying RNA silencing-based antiviral defense and gene regulation in eukaryotic cells. However, we now provide evidence that a class 1 RNase III is involved in suppression of RNA silencing. The single-stranded RNA genome of sweet potato chlorotic stunt virus (SPCSV) encodes an RNase III (RNase3) homologous to putative class 1 RNase IIIs of unknown function in rice and Arabidopsis. We show that RNase3 has dsRNA-specific endonuclease activity that enhances the RNA-silencing suppression activity of another protein (p22) encoded by SPCSV. RNase3 and p22 coexpression reduced siRNA accumulation more efficiently than p22 alone in Nicotiana benthamiana leaves expressing a strong silencing inducer (i.e., dsRNA). RNase3 did not cause intracellular silencing suppression or reduce accumulation of siRNA in the absence of p22 or enhance silencing suppression activity of a protein encoded by a heterologous virus. No other known RNA virus encodes an RNase III or uses two independent proteins cooperatively for RNA silencing suppression.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Crinivirus / enzymology*
  • Crinivirus / genetics
  • Crinivirus / pathogenicity*
  • Gene Silencing*
  • Genes, Viral
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Nicotiana / genetics
  • Nicotiana / virology
  • Plant Diseases / genetics
  • Plant Diseases / virology
  • Plants, Genetically Modified
  • RNA, Double-Stranded / genetics
  • RNA, Double-Stranded / metabolism
  • RNA, Plant / genetics*
  • RNA, Plant / metabolism*
  • RNA, Small Interfering / genetics
  • RNA, Small Interfering / metabolism
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Ribonuclease III / classification
  • Ribonuclease III / genetics*
  • Ribonuclease III / physiology*
  • Viral Proteins / genetics
  • Viral Proteins / metabolism

Substances

  • RNA, Double-Stranded
  • RNA, Plant
  • RNA, Small Interfering
  • Recombinant Proteins
  • Viral Proteins
  • Green Fluorescent Proteins
  • Ribonuclease III