A study of the anharmonic effects on the vibrational spectra of a realistic retinal chromophore model

Spectrochim Acta A Mol Biomol Spectrosc. 2005 Jun;61(8):1881-6. doi: 10.1016/j.saa.2004.07.017.

Abstract

Ab initio and vibrational self-consistent field (VSCF) computations are used to investigate the vibrational normal coordinates of the protonated Schiff base (PSB) 4-cis-gamma,eta-dimethyl-C9H9 NH2+. The ground and the first excited states are investigated. Both harmonic and anharmonic frequencies for the first three overtones of the ground and first excited states are reported. Special attention is payed to the discussion of the normal coordinates modes that involve the central C=C bond which plays a significant role in the isomerization process.

MeSH terms

  • Animals
  • Carbon / chemistry*
  • Computer Simulation
  • Imidazoles / chemistry*
  • Light
  • Models, Molecular
  • Models, Statistical
  • Purines / chemistry*
  • Retina / metabolism*
  • Schiff Bases
  • Software
  • Spectrophotometry, Infrared / methods*
  • Vibration

Substances

  • 8-ethyl-4-methyl-2-phenyl-4,5,7,8-tetrahydro-1H-imidazo(2,1-i)purin-5-one
  • Imidazoles
  • Purines
  • Schiff Bases
  • Carbon