Identification of three novel HLA class I alleles: HLA-A*0261, HLA-B*1585 and HLA-B*1587

Tissue Antigens. 2005 May;65(5):493-6. doi: 10.1111/j.1399-0039.2005.00391.x.

Abstract

Three novel human leucocyte antigen (HLA) class I alleles have been characterized by means of direct DNA sequencing analysis. HLA-A* 0261 showed sequence variation at conserved codon. It differs from HLA-A* 020601 by a single-nucleotide substitution at codon 57 (CCG-->GCG) resulting in an amino acid change from Pro to Ala. The sequences of HLA-B*1585 are similar to those of HLA-B*15010101, but differed five nucleotides on exon 3 resulting in three amino acid changes at residues 94 (Thr-->Ile), 95 (Leu-->Ile) and 103 (Val-->Leu). Likewise, HLA-B*1587 is identical to HLA-B*15010101 except at codons 80-83 (Asn-Leu-Arg-Gly-->Ile-Ala-Leu-Arg) which has been replaced by HLA-Bw4 motif. These alleles seemed to be generated by either a point mutation or a gene conversion-like event from alleles existing in the population with high frequencies.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alleles
  • Amino Acid Substitution
  • Base Sequence
  • Codon / genetics
  • Exons / genetics
  • Gene Conversion
  • Gene Frequency
  • Genes, MHC Class I*
  • HLA-A Antigens / chemistry
  • HLA-A Antigens / genetics*
  • HLA-A Antigens / isolation & purification
  • HLA-A2 Antigen
  • HLA-B Antigens / chemistry
  • HLA-B Antigens / genetics*
  • HLA-B Antigens / isolation & purification
  • HLA-B15 Antigen
  • Humans
  • Molecular Sequence Data
  • Point Mutation
  • Sequence Alignment
  • Sequence Homology, Nucleic Acid

Substances

  • Codon
  • HLA-A Antigens
  • HLA-A*02:61 antigen
  • HLA-A2 Antigen
  • HLA-B Antigens
  • HLA-B*15:85 antigen
  • HLA-B*15:87 antigen
  • HLA-B15 Antigen

Associated data

  • GENBANK/AY206696
  • GENBANK/AY206697
  • GENBANK/AY596955
  • GENBANK/AY596956
  • GENBANK/AY596957
  • GENBANK/AY596958