Promoter methylation of DAL-1/4.1B predicts poor prognosis in non-small cell lung cancer

Clin Cancer Res. 2005 Apr 15;11(8):2954-61. doi: 10.1158/1078-0432.CCR-04-2206.

Abstract

Purpose: DAL-1/4.1B is an actin-binding protein originally identified as a molecule whose expression is down-regulated in lung adenocarcinoma. We have previously shown that a lung tumor suppressor, TSLC1, associates with DAL-1, suggesting that both proteins act in the same cascade. The purpose of this study is to understand the molecular mechanisms and clinical significance of DAL-1 inactivation in lung cancer.

Experimental design: We studied aberration of the DAL-1 in 103 primary non-small cell lung cancers (NSCLC) and 18 lung cancer cells. Expression and allelic and methylation status of DAL-1 was examined by reverse transcription-PCR, microsatellite analysis, and bisulfite sequencing or bisulfite single-strand conformational polymorphism, respectively.

Results: Loss of DAL-1 expression was strongly correlated with promoter methylation in lung cancer cells, whereas DAL-1 expression was restored by a demethylating agent, 5-aza-2'-deoxycytidine. The DAL-1 promoter was methylated in 59 (57%) primary NSCLC tumors, 37% of which were associated with loss of heterozygosity around the DAL-1 on chromosomal region 18p11.3. In squamous cell carcinomas, DAL-1 methylation was observed in 9 of 10 tumors at stage I, whereas the incidence of methylation gradually increased in adenocarcinomas as they progressed [13 of 36 (36%), 4 of 12 (33%), 14 of 17 (82%), and 3 of 3 (100%) tumors at stages I, II, III, and IV, respectively; P = 0.0026]. Furthermore, in adenocarcinomas, disease-free survival and overall survival were significantly shorter in patients with tumors harboring the methylated DAL-1 (P = 0.0011 and P = 0.045, respectively).

Conclusions: DAL-1 methylation is involved in the development and progression of NSCLC and provides an indicator for poor prognosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Carcinoma, Non-Small-Cell Lung / genetics
  • Carcinoma, Non-Small-Cell Lung / pathology*
  • Cell Line, Tumor
  • Chromosomes, Human, Pair 18 / genetics
  • CpG Islands / genetics
  • DNA Methylation*
  • DNA, Neoplasm / chemistry
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / metabolism
  • Humans
  • Loss of Heterozygosity
  • Lung Neoplasms / genetics
  • Lung Neoplasms / pathology*
  • Membrane Proteins / genetics*
  • Microfilament Proteins
  • Mitotic Index
  • Polymorphism, Single-Stranded Conformational
  • Prognosis
  • Promoter Regions, Genetic / genetics*
  • Sequence Analysis, DNA
  • Survival Analysis
  • Tumor Suppressor Proteins / genetics*

Substances

  • DNA, Neoplasm
  • EPB41L3 protein, human
  • Membrane Proteins
  • Microfilament Proteins
  • Tumor Suppressor Proteins