Searching for the neural code underlying consciousness and cognition is one of the most important activities in contemporary neuroscience. Research with neuronal oscillations at the level of single-neuron, local cell assemblies, and network system have provided invaluable insights into different mechanisms of synaptic interactions involved in the emergence of cognitive acts. A cognitive neuroscience of conscious experience is gradually emerging from behavioral and neuroimaging studies, which can be successfully complemented with the quantitative EEG findings discussed here. This review is an attempt to highlight the value of state-dependent changes in human neurophysiology for a better understanding of the neurobiological substrate underlying those aspects of cognition drastically affected by sleep states. Recent advances related to synchronization mechanisms potentially involved in brain integration processes are discussed, emphasizing the value of scalp and intracranial EEG recordings at determining local and large-scale dynamics in the human brain. Evidence supporting the critical role of state-dependent synchrony in brain integration comes mainly from studies on the theta and gamma oscillations across the wake-sleep continuum, as revealed by human intracranial recordings. This review blends results from different levels of analysis with the firm conviction that state-dependent brain dynamics at different levels of neural integration can provide a deeper understanding of neurobiological correlates of consciousness and sleep functions.