Entropic stabilization of isolated beta-sheets

J Am Chem Soc. 2005 Apr 6;127(13):4675-9. doi: 10.1021/ja0437499.

Abstract

Temperature-dependent electric deflection measurements have been performed for a series of unsolvated alanine-based peptides (Ac-WA(n)-NH(2), where Ac = acetyl, W = tryptophan, A = alanine, and n = 3, 5, 10, 13, and 15). The measurements are interpreted using Monte Carlo simulations performed with a parallel tempering algorithm. Despite alanine's high helix propensity in solution, the results suggest that unsolvated Ac-WA(n)-NH(2) peptides with n > 10 adopt beta-sheet conformations at room temperature. Previous studies have shown that protonated alanine-based peptides adopt helical or globular conformations in the gas phase, depending on the location of the charge. Thus, the charge more than anything else controls the structure.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alanine / chemistry*
  • Algorithms
  • Computer Simulation
  • Models, Molecular
  • Monte Carlo Method
  • Peptides / chemistry*
  • Protein Structure, Secondary*
  • Thermodynamics
  • Tryptophan / chemistry*

Substances

  • Peptides
  • Tryptophan
  • Alanine