The 30S ribosomal P site: a function of 16S rRNA

FEBS Lett. 2005 Feb 7;579(4):855-8. doi: 10.1016/j.febslet.2004.11.026.

Abstract

The 30S ribosomal P site serves several functions in translation. It must specifically bind initiator tRNA during formation of the 30S initiation complex; bind the anticodon stem-loop of peptidyl-tRNA during the elongation phase; and help to maintain the translational reading frame when the A site is unoccupied. Early experiments provided evidence that 16S rRNA was an important component of the 30S P site. Footprinting and crosslinking studies later implicated specific nucleotides in interactions with tRNA. The crystal structures of the 30S subunit and 70S ribosome-tRNA complexes confirmed the interactions between 16S rRNA and tRNA, but also revealed contacts between tRNA and the C-terminal tails of proteins S9 and S13. Deletion of these tails now shows that the 16S rRNA contacts alone are sufficient to support protein synthesis in living cells.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.
  • Review

MeSH terms

  • Catalytic Domain
  • Crystallography
  • Nucleic Acid Conformation
  • Protein Structure, Secondary
  • RNA, Ribosomal, 16S / chemistry*
  • RNA, Ribosomal, 16S / metabolism
  • RNA, Ribosomal, 16S / physiology*
  • RNA, Transfer / chemistry
  • RNA, Transfer / metabolism
  • Ribosomal Proteins / chemistry
  • Ribosomal Proteins / physiology
  • Ribosomes / chemistry
  • Ribosomes / metabolism
  • Ribosomes / physiology*

Substances

  • RNA, Ribosomal, 16S
  • Ribosomal Proteins
  • RNA, Transfer