The structure of rabbit extracellular superoxide dismutase differs from the human protein

Biochemistry. 2004 Nov 9;43(44):14275-81. doi: 10.1021/bi048526+.

Abstract

The cDNA sequence encoding rabbit, mouse, and rat extracellular superoxide dismutase (EC-SOD) predicts that the protein contains five cysteine residues. Human EC-SOD contains an additional cysteine residue and folds into two forms with distinct disulfide bridge patterns. One form is enzymatically active (aEC-SOD), while the other is inactive (iEC-SOD). Due to the lack of the additional cysteine residue rabbit, mouse, and rat EC-SOD are unable to generate an inactive fold identical to human iEC-SOD. The amino acid sequences predict the formation of aEC-SOD only, but other folding variants cannot be ruled out based on the heterogeneity observed for human EC-SOD. To test this, we purified EC-SOD from rabbit plasma and determined the disulfide bridge pattern. The results revealed that the disulfide bridges are homogeneous and identical to human aEC-SOD. Four cysteine residues are involved in two intra-disulfide bonds while the C-terminal cysteine residue forms an intersubunit disulfide bond. No evidence for other folding variants was detected. These findings show that rabbit EC-SOD exists as an enzymatically active form only. The absence of iEC-SOD in rabbits suggests that the structure and aspects of the physiological function of EC-SOD differs significantly between rabbit and humans. This is an important notion to take when using these animals as model systems for oxidative stress.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cysteine / metabolism
  • Dimerization
  • Disulfides / metabolism
  • Enzyme Activation
  • Extracellular Matrix / enzymology*
  • Humans
  • Mice
  • Molecular Sequence Data
  • Peptide Fragments / metabolism
  • Rabbits
  • Rats
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Superoxide Dismutase / blood
  • Superoxide Dismutase / chemistry*
  • Superoxide Dismutase / metabolism
  • Trypsin / metabolism

Substances

  • Disulfides
  • Peptide Fragments
  • SOD3 protein, human
  • Sod3 protein, mouse
  • Sod3 protein, rat
  • Superoxide Dismutase
  • Trypsin
  • Cysteine