Directional analysis of digitized three-dimensional images by configuration counts

J Microsc. 2004 Nov;216(Pt 2):175-85. doi: 10.1111/j.0022-2720.2004.01405.x.

Abstract

A method for estimating the orientated rose of normal directions of a three-dimensional (3D) set Z from a digitization of Z, i.e. a voxel image, is presented. It is based on counts of informative configurations in n x n x n voxel cubes. An algorithm for finding all informative configurations is proposed and an estimation procedure is described in detail for the case n= 2. The presented method is a 3D version of a method of estimating the orientated rose of binary planar images using n x n configurations. A new feature is the design-based approach, being more appropriate for biomedical image analysis than the formerly applied model-based approach.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Anisotropy
  • Image Processing, Computer-Assisted / methods*
  • Imaging, Three-Dimensional / methods*
  • Models, Theoretical*