Involvement of poly(ADP-ribose) polymerase-1 and XRCC1/DNA ligase III in an alternative route for DNA double-strand breaks rejoining

J Biol Chem. 2004 Dec 31;279(53):55117-26. doi: 10.1074/jbc.M404524200. Epub 2004 Oct 21.

Abstract

The efficient repair of DNA double-strand breaks (DSBs) is critical for the maintenance of genomic integrity. In mammalian cells, the nonhomologous end-joining process that represents the predominant repair pathway relies on the DNA-dependent protein kinase (DNA-PK) and the XRCC4-DNA ligase IV complex. Nonetheless, several in vitro and in vivo results indicate that mammalian cells use more than a single end-joining mechanism. While searching for a DNA-PK-independent end-joining activity, we found that the pretreatment of DNA-PK-proficient and -deficient rodent cells with an inhibitor of the poly(ADP-ribose) polymerase-1 enzyme (PARP-1) led to increased cytotoxicity of the highly efficient DNA double-strand breaking compound calicheamicin gamma1. In addition, the repair kinetics of the DSBs induced by calicheamicin gamma1 was delayed both in PARP-1-proficient cells pretreated with the PARP-1 inhibitor and in PARP-1-deficient cells. In order to get new insights into the mechanism of an alternative route for DSBs repair, we have established a new synapsis and end-joining two-step assay in vitro, operating on DSBs with either nuclear protein extracts or recombinant proteins. We found an end-joining activity independent of the DNA-PK/XRCC4-ligase IV complex but that actually required a novel synapsis activity of PARP-1 and the ligation activity of the XRCC1-DNA ligase III complex, proteins otherwise involved in the base excision repair pathway. Taken together, these results strongly suggest that a PARP-1-dependent DSBs end-joining activity may exist in mammalian cells. We propose that this mechanism could act as an alternative route of DSBs repair that complements the DNA-PK/XRCC4/ligase IV-dependent nonhomologous end-joining.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aminoglycosides / pharmacology
  • Animals
  • Antibiotics, Antineoplastic / pharmacology
  • Cell Nucleus / metabolism
  • Cricetinae
  • DNA / chemistry
  • DNA / metabolism
  • DNA Damage*
  • DNA Ligase ATP
  • DNA Ligases / metabolism
  • DNA Repair*
  • DNA, Complementary / metabolism
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / physiology*
  • Dose-Response Relationship, Drug
  • Electrophoresis, Polyacrylamide Gel
  • Enediynes
  • Fibroblasts / metabolism
  • HeLa Cells / metabolism
  • Histones / metabolism
  • Humans
  • Immunoblotting
  • Kinetics
  • Mice
  • Models, Biological
  • Models, Genetic
  • Mutagens
  • Mutation
  • Oligonucleotides / chemistry
  • Phosphorylation
  • Poly(ADP-ribose) Polymerases / chemistry
  • Poly(ADP-ribose) Polymerases / physiology*
  • Recombinant Proteins / chemistry
  • Time Factors
  • X-ray Repair Cross Complementing Protein 1

Substances

  • Aminoglycosides
  • Antibiotics, Antineoplastic
  • DNA, Complementary
  • DNA-Binding Proteins
  • Enediynes
  • H2AX protein, mouse
  • Histones
  • LIG4 protein, human
  • Mutagens
  • Oligonucleotides
  • Recombinant Proteins
  • X-ray Repair Cross Complementing Protein 1
  • XRCC1 protein, human
  • Xrcc1 protein, mouse
  • calicheamicin gamma(1)I
  • DNA
  • Poly(ADP-ribose) Polymerases
  • DNA Ligases
  • DNA Ligase ATP