Clostridium jejuense sp. nov., isolated from soil

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1465-1468. doi: 10.1099/ijs.0.63128-0.

Abstract

A strictly anaerobic, mesophilic, endospore-forming bacterium, designated strain HY-35-12T, was isolated from a soil sample in Jeju, Korea. Cells of this isolate were Gram-positive, motile rods that formed oval to spherical terminal spores. Strain HY-35-12T grew optimally at 30 degrees C, pH 7.0 and 0-0.5 % (w/v) NaCl. The isolate produced pyruvate, lactate, acetate, formate and hydrogen as fermentation end products from glucose. The G + C content of DNA of the isolate was 41 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the organism formed a monophyletic clade with Clostridium xylanovorans and Clostridium aminovalericum in cluster XIVa of the genus Clostridium. The closest phylogenetic neighbour was C. xylanovorans, with 96.65 % 16S rRNA gene sequence similarity. Several physiological and chemotaxonomic properties were identified that enable strain HY-35-12T to be distinguished from phylogenetically related clostridia. On the basis of polyphasic characteristics, it is proposed that strain HY-35-12T (= IMSNU 40003T = KCTC 5026T = DSM 15929T) represents a novel species, Clostridium jejuense sp. nov.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetic Acid / metabolism
  • Anaerobiosis
  • Anti-Bacterial Agents / pharmacology
  • Base Composition
  • Clostridium / classification*
  • Clostridium / cytology
  • Clostridium / isolation & purification*
  • Clostridium / physiology
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Fermentation
  • Formates / metabolism
  • Genes, rRNA
  • Glucose / metabolism
  • Hydrogen / metabolism
  • Hydrogen-Ion Concentration
  • Korea
  • Lactic Acid / metabolism
  • Molecular Sequence Data
  • Movement
  • Phylogeny
  • Pyruvic Acid / metabolism
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sodium Chloride / pharmacology
  • Soil Microbiology*
  • Spores, Bacterial / cytology
  • Temperature

Substances

  • Anti-Bacterial Agents
  • DNA, Bacterial
  • DNA, Ribosomal
  • Formates
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • formic acid
  • Lactic Acid
  • Sodium Chloride
  • Hydrogen
  • Pyruvic Acid
  • Glucose
  • Acetic Acid

Associated data

  • GENBANK/AY494606