An ATP-independent U2 small nuclear ribonucleoprotein particle/precursor mRNA complex requires both splice sites and the polypyrimidine tract

Proc Natl Acad Sci U S A. 1992 Jun 15;89(12):5482-6. doi: 10.1073/pnas.89.12.5482.

Abstract

A complex is formed upon incubation of a precursor mRNA (pre-mRNA) with HeLA cell nuclear extract in the absence of added ATP (-ATP complex). Pre-mRNAs with mutations in the 5' splice site, the 3' splice site, or the polypyrimidine tract did not form this complex. Once formed, the -ATP complex was stable to competition by excess pre-mRNA. The complex was shown to contain the U2 small nuclear ribonucleoprotein particle (snRNP) and was distinct from the previously described U2 snRNP/pre-mRNA complex, the prespliceosome. These complexes have different electrophoretic mobilities, ATP requirements, and sensitivities to mutations of the 5' splice site. Although U1 snRNP was not found in the -ATP complex, a requirement for the U1 snRNP was suggested by immunodepletion experiments. The possible implications for the study of spliceosome formation are discussed.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenosine Triphosphate / metabolism*
  • Base Sequence
  • Cell Nucleus / metabolism*
  • HeLa Cells
  • Humans
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Oligodeoxyribonucleotides
  • Protein Binding
  • RNA Precursors / genetics
  • RNA Precursors / isolation & purification
  • RNA Precursors / metabolism*
  • RNA Splicing*
  • RNA, Small Nuclear / metabolism*
  • Ribonucleoproteins / isolation & purification
  • Ribonucleoproteins / metabolism*
  • Ribonucleoproteins, Small Nuclear

Substances

  • Oligodeoxyribonucleotides
  • RNA Precursors
  • RNA, Small Nuclear
  • Ribonucleoproteins
  • Ribonucleoproteins, Small Nuclear
  • Adenosine Triphosphate