The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo

Nucleic Acids Res. 2004 Aug 3;32(14):4091-9. doi: 10.1093/nar/gkh732. Print 2004.

Abstract

The transcription termination factor (TTF)-I is a multifunctional nucleolar protein that terminates ribosomal gene transcription, mediates replication fork arrest and regulates RNA polymerase I transcription on chromatin. TTF-I plays a dual role in rDNA regulation, being involved in both activation and silencing of rDNA transcription. The N-terminal part of TTF-I contains a negative regulatory domain (NRD) that inhibits DNA binding. Here we show that interactions between the NRD and the C-terminal part of TTF-I mask the DNA-binding domain of TTF-I. However, interaction with TIP5, a subunit of the nucleolar chromatin remodeling complex, NoRC, recovers DNA-binding activity. We have mapped the protein domains that mediate the interaction between TTF-I and TIP5. The association of TIP5 with the NRD facilitates DNA binding of TTF-I and leads to the recruitment of NoRC to the rDNA promoter. Thus, TTF-I and NoRC act in concert to silence rDNA transcription.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chromatin Assembly and Disassembly*
  • Chromosomal Proteins, Non-Histone / metabolism
  • DNA / metabolism
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / metabolism*
  • Gene Silencing*
  • Genes, rRNA*
  • HeLa Cells
  • Humans
  • Macromolecular Substances
  • Mice
  • NIH 3T3 Cells
  • Protein Structure, Tertiary
  • Protein Subunits / metabolism
  • RNA Polymerase I / antagonists & inhibitors
  • Transcription Factors
  • Transcription, Genetic

Substances

  • Chromosomal Proteins, Non-Histone
  • DNA-Binding Proteins
  • Macromolecular Substances
  • Protein Subunits
  • TTF1 protein, human
  • Transcription Factors
  • Ttf1 protein, mouse
  • DNA
  • RNA Polymerase I