Solid-state NMR investigation of the selective perturbation of lipid bilayers by the cyclic antimicrobial peptide RTD-1

Biochemistry. 2004 Aug 3;43(30):9800-12. doi: 10.1021/bi036243w.

Abstract

RTD-1 is a cyclic beta-hairpin antimicrobial peptide isolated from rhesus macaque leukocytes. Using (31)P, (2)H, (13)C, and (15)N solid-state NMR, we investigated the interaction of RTD-1 with lipid bilayers of different compositions. (31)P and (2)H NMR of uniaxially oriented membranes provided valuable information about how RTD-1 affects the static and dynamic disorder of the bilayer. Toward phosphatidylcholine (PC) bilayers, RTD-1 causes moderate orientational disorder independent of the bilayer thickness, suggesting that RTD-1 binds to the surface of PC bilayers without perturbing its hydrophobic core. Addition of cholesterol to the POPC membrane does not affect the orientational disorder. In contrast, binding of RTD-1 to anionic bilayers containing PC and phosphatidylglycerol lipids induces much greater orientational disorder without affecting the dynamic disorder of the membrane. These correlate with the selectivity of RTD-1 for anionic bacterial membranes as opposed to cholesterol-rich zwitterionic mammalian membranes. Line shape simulations indicate that RTD-1 induces the formation of micrometer-diameter lipid cylinders in anionic membranes. The curvature stress induced by RTD-1 may underlie the antimicrobial activity of RTD-1. (13)C and (15)N anisotropic chemical shifts of RTD-1 in oriented PC bilayers indicate that the peptide adopts a distribution of orientations relative to the magnetic field. This is most likely due to a small fraction of lipid cylinders that change the RTD-1 orientation with respect to the magnetic field. Membrane-bound RTD-1 exhibits narrow line widths in magic-angle spinning spectra, but the sideband intensities indicate rigid-limit anisotropies. These suggest that RTD-1 has a well-defined secondary structure and is likely aggregated in the membrane. These structural and dynamical features of RTD-1 differ significantly from those of PG-1, a related beta-hairpin antimicrobial peptide.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Anions / chemistry
  • Antimicrobial Cationic Peptides / chemical synthesis
  • Antimicrobial Cationic Peptides / metabolism*
  • Cell Membrane / chemistry
  • Cell Membrane / microbiology
  • Cholesterol / chemistry
  • Dimyristoylphosphatidylcholine / chemistry
  • Lipid Bilayers / chemistry*
  • Lipid Bilayers / metabolism*
  • Macaca mulatta
  • Magnetic Resonance Spectroscopy / methods
  • Models, Chemical
  • Molecular Sequence Data
  • Peptides, Cyclic / chemical synthesis
  • Peptides, Cyclic / metabolism*
  • Phosphatidylcholines / chemistry
  • Phosphorus Isotopes / chemistry
  • Phosphorylcholine / chemistry
  • alpha-Defensins

Substances

  • Anions
  • Antimicrobial Cationic Peptides
  • DEFA1A3 protein, human
  • Lipid Bilayers
  • Peptides, Cyclic
  • Phosphatidylcholines
  • Phosphorus Isotopes
  • alpha-Defensins
  • Phosphorylcholine
  • 1,2-linoleoylphosphatidylcholine
  • Cholesterol
  • 1-palmitoyl-2-oleoylphosphatidylcholine
  • Dimyristoylphosphatidylcholine