Molecular cloning and characterization of cDNA encoding fibrinolytic enzyme-3 from earthworm Eisenia foetida

Acta Biochim Biophys Sin (Shanghai). 2004 Apr;36(4):303-8. doi: 10.1093/abbs/36.4.303.

Abstract

The earthworm fibrinolytic enzyme-3 (EFE-3, GenBank accession No: AY438622), from the earthworm Eisenia foetida, is a component of earthworm fibrinolytic enzymes. In this study, cDNA encoding the EFE-3 was cloned by RT-PCR. The cDNA contained an open reading frame of 741 nucleotides, which encoded a deduced protein of 247 amino acid residues, including signal sequences. EFE-3 showed a high degree of homology to earthworm (Lumbricus rebullus) proteases F-III-1, F-III-2, and bovine trypsin. The recombinant EFE-3 was expressed in E. coli as inclusion bodies, and the gene encoding the native form of EFE-3 was expressed in COS-7 cells in the medium. Both the refolding product of inclusion bodies and the secreted protease could dissolve the artificial fibrin plate.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • COS Cells
  • Chlorocebus aethiops
  • Cloning, Molecular*
  • Computational Biology
  • Culture Media
  • DNA, Complementary / genetics*
  • Electrophoresis, Polyacrylamide Gel
  • Endopeptidases / chemistry*
  • Endopeptidases / genetics*
  • Endopeptidases / metabolism
  • Escherichia coli / genetics
  • Fibrinolysis
  • Gene Expression
  • Inclusion Bodies / metabolism
  • Molecular Sequence Data
  • Oligochaeta / enzymology*
  • Oligochaeta / genetics*
  • Open Reading Frames
  • Protein Folding
  • Protein Sorting Signals
  • Recombinant Proteins / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid

Substances

  • Culture Media
  • DNA, Complementary
  • Protein Sorting Signals
  • Recombinant Proteins
  • Endopeptidases
  • lumbrokinase

Associated data

  • GENBANK/AY438622
  • GENBANK/U25643
  • GENBANK/U25648