CtBP contributes quantitatively to Knirps repression activity in an NAD binding-dependent manner

Mol Cell Biol. 2004 Jul;24(13):5953-66. doi: 10.1128/MCB.24.13.5953-5966.2004.

Abstract

Transcriptional repressors often employ multiple activities, but the molecular mechanisms and physiological relevance of this functional diversity remain obscure. The Drosophila melanogaster Knirps repressor uses CtBP corepressor-dependent and -independent pathways. To separately analyze the components of Knirps repression activity, we elucidated the specific repression properties of CtBP and of Knirps subdomains. Like Knirps, CtBP represses adjacent transcriptional activators; but unlike Knirps, CtBP is unable to repress basal promoter elements. We determined that the ability of CtBP to recapitulate only a subset of Knirps activities is due to a quantitative, rather than qualitative, deficiency in repression activity. The CtBP-dependent portion of Knirps synergizes with the CtBP-independent repression activity to potently repress promoter elements from enhancer- or promoter-proximal positions. This result indicates that multiple repression activities are combined to exceed critical thresholds on target genes. CtBP mutant proteins unable to bind NAD fail to interact with DNA-bound factors. We show that DNA-binding Gal4-CtBP fusion proteins also require NAD binding for activity, indicating that NAD plays a role in repression at a step subsequent to CtBP recruitment to the promoter.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alcohol Oxidoreductases
  • Amino Acid Sequence
  • Animals
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism*
  • DNA-Binding Proteins / physiology*
  • Drosophila Proteins / metabolism*
  • Drosophila Proteins / physiology
  • Mutation
  • NAD / metabolism*
  • NAD / physiology
  • Phosphoproteins / genetics
  • Phosphoproteins / metabolism
  • Phosphoproteins / physiology*
  • Promoter Regions, Genetic
  • Protein Binding
  • Repressor Proteins / metabolism*
  • Repressor Proteins / physiology*
  • Trans-Activators

Substances

  • DNA-Binding Proteins
  • Drosophila Proteins
  • Phosphoproteins
  • Repressor Proteins
  • Trans-Activators
  • kni protein, Drosophila
  • NAD
  • Alcohol Oxidoreductases
  • C-terminal binding protein