Genetics of barley hooded suppression

Genetics. 2004 May;167(1):439-48. doi: 10.1534/genetics.167.1.439.

Abstract

The molecular basis of the barley dominant Hooded (K) mutant is a duplication of 305 bp in intron IV of the homeobox gene Bkn3. A chemical mutagenesis screen was carried out to identify genetical factors that participate in Bkn3 intron-mediated gene regulation. Plants from recurrently mutagenized KK seeds were examined for the suppression of the hooded awn phenotype induced by the K allele and, in total, 41 suK (suppressor of K) recessive mutants were identified. Complementation tests established the existence of five suK loci, and alleles suKB-4, suKC-33, suKD-25, suKE-74, and suKF-76 were studied in detail. All K-suppressed mutants showed a short-awn phenotype. The suK loci have been mapped by bulked segregant analysis nested in a standard mapping procedure based on AFLP markers. K suppressor loci suKB, B, E, and F all map in a short interval of chromosome 7H, while the locus suKD is assigned to chromosome 5H. A complementation test between the four suK mutants mapping on chromosome 7H and the short-awn mutant lks2, located nearby, excluded the allelism between suK loci and lks2. The last experiment made clear that the short-awn phenotype of suK mutants is due to a specific dominant function of the K allele, a function that is independent from the control on hood formation. The suK loci are discussed as candidate participants in the regulation of Bkn3 expression.

MeSH terms

  • Alleles
  • Binding Sites
  • Chromosome Mapping
  • Crosses, Genetic
  • Gene Expression Regulation*
  • Gene Expression Regulation, Plant*
  • Genes, Homeobox
  • Genes, Plant*
  • Genetic Complementation Test
  • Genetic Linkage
  • Genotype
  • Homeodomain Proteins / genetics*
  • Hordeum / genetics*
  • Hordeum / metabolism
  • Introns
  • Models, Genetic
  • Mutagenesis
  • Mutation*
  • Phenotype
  • Plant Proteins / genetics*
  • Polymorphism, Genetic

Substances

  • Homeodomain Proteins
  • Plant Proteins