Comparative analysis on the 5'-untranslated region of bovine viral diarrhea virus isolated in Korea

Res Vet Sci. 2004 Apr;76(2):157-63. doi: 10.1016/j.rvsc.2003.10.003.

Abstract

Samples of 249 bovine abortuses, one intestine, and four diarrheal stools from 254 cows were collected, and bovine viral diarrhea virus (BVDV) was detected by reverse transcription-polymerase chain reaction (RT-PCR). Subsequently, virus isolation was preformed with PCR-positive samples, and then PCR product of 5(')-untranslated region (UTR) of BVDV isolate was sequenced and analyzed. Among the samples collected, 20 (from 17 bovine abortuses, one intestine, and two diarrheal stools) were positive for BVDV RT-PCR; four BVDVs (from two bovine abortuses, one intestine, and one diarrheal stool) were isolated. When the four isolates were biotyped in cell culture, one BVDV isolate from a bovine abortus was cytopathic and the others were non-cytopathic. In addition, three isolates were genotyped as BVDV-1 and one isolate from a diarrheal stool as BVDV-2. In phylogenetic analysis, it suggested that the BVDV-2 isolate in Korea is closer to the North American strains than Asian strains. This is the first report on the identification and isolation of BVDV-2 in Korea.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions / chemistry
  • 5' Untranslated Regions / genetics*
  • Abortion, Veterinary / virology
  • Animals
  • Base Sequence
  • Bovine Virus Diarrhea-Mucosal Disease / virology*
  • Cattle
  • Diarrhea Viruses, Bovine Viral / genetics*
  • Diarrhea Viruses, Bovine Viral / isolation & purification
  • Female
  • Genetic Variation
  • Korea
  • Phylogeny
  • RNA, Viral / chemistry
  • RNA, Viral / genetics
  • Reverse Transcriptase Polymerase Chain Reaction / veterinary

Substances

  • 5' Untranslated Regions
  • RNA, Viral