Conformation of beta-methylmelibiose bound to the ricin B-chain as determined from transferred nuclear Overhauser effects

Biochemistry. 1992 Oct 6;31(39):9339-49. doi: 10.1021/bi00154a003.

Abstract

Transferred nuclear Overhauser effect (TRNOE) experiments have revealed a change in the torsion angles about the alpha-1-6 glycosidic bond of methyl beta-melibioside upon binding of the melibioside to the ricin B-chain (Rb). A full relaxation rate matrix simulation of experimental buildup curves aided in quantitative interpretation of 1D selective inversion recovery TRNOE experiments. The data are consistent with a model in which both major (omega approximately 170 degrees) and minor (omega approximately -60 degrees) conformers for methyl beta-melibioside are significantly populated in solution while the Rb/methyl beta-melibioside complex has little of the minor conformer populated. The results indicate that the ricin B-chain excludes binding of certain ligand conformations on the basis of unfavorable interactions between the protein surface and remote portions of the disaccharide system.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Ligands
  • Magnetic Resonance Spectroscopy
  • Melibiose / analogs & derivatives*
  • Melibiose / chemistry
  • Models, Molecular
  • Molecular Conformation
  • Plant Lectins
  • Plants, Toxic
  • Ricin / chemistry*
  • Ricinus / chemistry

Substances

  • Ligands
  • Plant Lectins
  • beta-methylmelibiose
  • Ricin
  • Melibiose